PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.B7QUS
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 182aa    MW: 20223.5 Da    PI: 8.3186
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.B7QUSgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR126.12.9e-081321782368
         FAR1  23 krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkv 68 
                  +++g++ k+ f+C+++g re+++ + +++++ +++etrt+C+ k++v
  Aradu.B7QUS 132 DDEGNVLKKFFYCNRWGLREKKHYEkADRKKAHKVETRTNCNVKFVV 178
                  56789**************9998874677778999*******99988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.0E-6132178IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
MGHWHLTVRC ELKKVVRVDL NIKVSGAGWC NGYIGGISSR YIHSESKGNS DFSGQWTNGW  60
SSDSDEEKVS KGLESPSRVS KESKPVERVN VSGLGDEGGT VPSSESPGGL GDQISDDVET  120
SMLSNSGYSI KDDEGNVLKK FFYCNRWGLR EKKHYEKADR KKAHKVETRT NCNVKFVVFL  180
DK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.B7QUS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016177949.13e-54protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_025684799.13e-54protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445CRX52e-67A0A445CRX5_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1913225