PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.BF0WP
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 308aa    MW: 36283 Da    PI: 8.0096
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.BF0WPgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR160.64.9e-19106197191
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  +fY++YAk  GF  r +++ +   ng+  +r++vC++eg+r+++  + ++++r +r+ tr+ C+a+++ + +    kw+v+ +e+ HnH+l p
  Aradu.BF0WP 106 QFYKNYAKVHGFVARCDEKGYD-FNGNLNMRQMVCNREGTRRKKYLEmENRKRDHRPITRVMCQARIRFHYNMkLRKWKVIVFEETHNHNLIP 197
                  6**************9998887.9999***************9988867788889***************998799**************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.8E-16106197IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MSQGYWSLTF HIYAYGHKPT KMETYNTSMG SVHKNSTKSS VEFDDLSFEY SGSSEENDIN  60
ISQKKGTIDE AMKMVDHGDG FGEVEKKLTE LTKDDIWGIE HDSCAQFYKN YAKVHGFVAR  120
CDEKGYDFNG NLNMRQMVCN REGTRRKKYL EMENRKRDHR PITRVMCQAR IRFHYNMKLR  180
KWKVIVFEET HNHNLIPPKY IQFVPAYRVM TEADKVQANS LHDYVRQYWT NELLSDFKSL  240
FSSPVLTTYF EDIEKEATNI FTQNMFKEVR NEILEASKLN VVGHSNNGNK IDVRMNKYQE  300
PAIEYKVQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.BF0WP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015934269.21e-137protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_025635733.11e-137protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444X7U31e-136A0A444X7U3_ARAHY; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.12e-15FAR1-related sequence 11