PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.BNY19

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 142aa MW: 16036.8 Da PI: 4.9832

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.BNY19	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	25.1	5.9e-08	88	137	1	47
FAR1 1 kfYneYAkevGFsvrkskskks...krngeitkrtfvCskegkreeekkk 47 +fY +YAk+vGF +r+++++ k++ +++ + Cs e +re + k+ Aradu.BNY19 88 EFYTNYAKKVGFVTRIRNTNFDktrKDSMIPVNQSLHCSHESYREARVKT 137 6***********999887664323334457899*******999887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	2.0E-5	88	138	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 142 aa Download sequence Send to blast
MEQAICEGAL YGTTYDDIDQ YNSCDVNVPS LSEDDTHHVD KGKDSGSVIE VVDDAMAVNN 60 ELSDHTGIPL DEIPYVGLRF VSLQRAQEFY TNYAKKVGFV TRIRNTNFDK TRKDSMIPVN 120 QSLHCSHESY REARVKTATR VK

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.BNY19

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025702556.1	1e-95	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A444WRI8	4e-95	A0A444WRI8_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF14126	2	17

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	1e-11	FAR1 family protein