PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.BQ75M

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 275aa MW: 31494.1 Da PI: 9.3529

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.BQ75M	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	81.1	1.9e-25	117	208	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 +fY++Y++ GF +r+ k+ ++ +ng i+++t+ C++eg+r+++ + + ++r+++++tr+gC a++++k+++ gkw+v+++ +HnHel p Aradu.BQ75M 117 RFYEQYSRGKGFAMRVGKKLRN-KNGDIVRYTYLCNREGFRQKKWLElEGRKREHKVVTRCGCMAEMRIKQNDqMGKWYVSRFIDDHNHELLP 208 5***************9999.7777************9888678889999************999*************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	4.4E-23	117	208	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence Send to blast
PAAGGHINHR SHIIPAVPLR VEVWHCRRSV RSSHLLERAL IVFNVPLSTP LCPVTVSSVR 60 ASLPCETSLD IGMDEAAFGT EYLDGDGDLG NDVRGSGLTR PEEVMEMLFN SPDEAARFYE 120 QYSRGKGFAM RVGKKLRNKN GDIVRYTYLC NREGFRQKKW LELEGRKREH KVVTRCGCMA 180 EMRIKQNDQM GKWYVSRFID DHNHELLPPK LVEYLPPHRK MSDVDVAHMD SLRQVGISVP 240 KIYESLAAQA GGFDHIPFTK RDMYNEVRRQ RGMRK

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.BQ75M

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015948569.1	1e-149	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A444Y3D7	1e-141	A0A444Y3D7_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF9185	2	37

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-24	FAR1-related sequence 5