PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.BTN1Q
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 530aa    MW: 59892.8 Da    PI: 9.1562
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.BTN1QgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR154.63.6e-1749135191
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  kfY++YAk +GFs+r+  ++++   +ei+++  +Cs+egk +++ +    +++t+++   +C a++ ++  k  g w ++k++l+H+H+++p
  Aradu.BTN1Q  49 KFYRNYAKAAGFSTRVWCTNRK--GNEIKNQLITCSREGKWKSKISP---TEKTNPTAGLNCPARIYIHTLKdVGAWIISKVVLDHSHPCCP 135
                  6***************987776..888**************998877...8999**************998879***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.7E-1449135IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 530 aa     Download sequence    Send to blast
MDPSSSDCVL NPGEVDYGSN EVPEPLSVVD DELVPKVGMT FTTLEDAKKF YRNYAKAAGF  60
STRVWCTNRK GNEIKNQLIT CSREGKWKSK ISPTEKTNPT AGLNCPARIY IHTLKDVGAW  120
IISKVVLDHS HPCCPSKAEM LKQHRELSMS IRRTIENNDE ADIRPSKTYQ SFVAAAGDLY  180
EDRHIWVPIY LDHHFWAGMR STQRSESMHS FFNKYITRNS SLIQFVKQYD NCLGSREQAE  240
RESDAADFHT VIPCATKSSI EAQFQDAYTH TKFREVQAQF RGKANCITRL KNSALGYSVY  300
EVGEQVSSSI FDKFAVTYDS VAAEVKCQRL LFESKGILCR HALSVLSFEQ VSQVSPRYIL  360
ERWSKKVKRQ HTHIKSSHDE PLMEPRSKKF DQLVFRSQNI CEFASESEEL TAILHRAYDN  420
VMAEMEALKG KRKGTSSLSH EDANLESVNE LQSPPRIRTR GRPKNRLGSK LEKQIANATK  480
KKKTKVLSEI NLFDAASVAH SSCSINGAFK LQPISGTSYK LSVQGTSSRG
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.BTN1Q
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371780.0HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020997233.10.0protein FAR-RED IMPAIRED RESPONSE 1-like
TrEMBLA0A445EF950.0A0A445EF95_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.12e-33FAR1 family protein