PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.BZU3P
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family LFY
Protein Properties Length: 421aa    MW: 47371.3 Da    PI: 6.4218
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.BZU3PgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY630.33.2e-19214011384
      FLO_LFY   1 mdp.eafsaslfkwdpraaaaapp.......arlleeaavseap....leaaaaaaarklreleelfkayGvryltvakiaelGftvstLvdmkdeel 86 
                  mdp +af++slfkwdpr++  +pp        ++l  +++++ +    + +    +  +l +leel++ayG+ry+t+ak+aelGftv tL+dmkd+e+
  Aradu.BZU3P   1 MDPaDAFTTSLFKWDPRTVLPPPPssatrppPQILDYTVAPP-AvspsSVSFPPPKRLDLGGLEELLQAYGIRYYTAAKMAELGFTVRTLIDMKDDEI 97 
                  666256***********9996655333322222322222222.122212222233334466************************************* PP

      FLO_LFY  87 ddlmkslseifrldllvGeryGikaavraerrrleeeeaekkrrkllsedeet.aldalsqeglseepvqe.ekeaagsggeglgeaelvaaeekkse 182
                  dd+m+sls+ifr+dllvGeryG+kaavraerrrleeee  k+r+ l ++d++t aldalsqeglseepv + ekeaagsgg++  ++e+v+  e++++
  Aradu.BZU3P  98 DDMMNSLSQIFRWDLLVGERYGVKAAVRAERRRLEEEELIKRRNFLCTTDTTTnALDALSQEGLSEEPVVQqEKEAAGSGGGS--TWEVVGGGEERRK 193
                  **************************************8888888878877666**************987477788998887..9999998864433 PP

      FLO_LFY 183 eekkkaskkkqkrkkkkelkse.........ededee.eeededeegsgedgeerqrehPfivtepgevargkknGLDYLfdLyeqCrefLlqvqkia 270
                  + +++++++++++ ++k              e+e+ e ee+d  e ++g +g erqrehPfivtepgevargkknGLDYLf+LyeqCrefL+qvq+ia
  Aradu.BZU3P 194 QVQQERRRRRSNKINNK----GinrsnnedgEEEELEgEENDMIEGSNGGNGGERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQAIA 287
                  33333322222222222....12233332322222110222333334777888********************************************* PP

      FLO_LFY 271 kerGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiW 368
                  k+rGekcPtkvtnqvfryakkagasyinkPkmrhYvhCYalhcLde+asn+lrr+fkergenvGawrqacykplvaiaarqgwdida+fnahprLsiW
  Aradu.BZU3P 288 KDRGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEDASNELRRTFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSIW 385
                  ************************************************************************************************** PP

      FLO_LFY 369 YvPtkLrqLChlersk 384
                  YvPtkLrqLCh+e ++
  Aradu.BZU3P 386 YVPTKLRQLCHAESNN 401
                  ************9887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF016981.2E-1981401IPR002910Floricaula/leafy protein
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010077Biological Processmaintenance of inflorescence meristem identity
GO:0010582Biological Processfloral meristem determinacy
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0031490Molecular Functionchromatin DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
Sequence ? help Back to Top
Protein Sequence    Length: 421 aa     Download sequence    Send to blast
MDPADAFTTS LFKWDPRTVL PPPPSSATRP PPQILDYTVA PPAVSPSSVS FPPPKRLDLG  60
GLEELLQAYG IRYYTAAKMA ELGFTVRTLI DMKDDEIDDM MNSLSQIFRW DLLVGERYGV  120
KAAVRAERRR LEEEELIKRR NFLCTTDTTT NALDALSQEG LSEEPVVQQE KEAAGSGGGS  180
TWEVVGGGEE RRKQVQQERR RRRSNKINNK GINRSNNEDG EEEELEGEEN DMIEGSNGGN  240
GGERQREHPF IVTEPGEVAR GKKNGLDYLF HLYEQCREFL IQVQAIAKDR GEKCPTKVTN  300
QVFRYAKKAG ASYINKPKMR HYVHCYALHC LDEDASNELR RTFKERGENV GAWRQACYKP  360
LVAIAARQGW DIDAIFNAHP RLSIWYVPTK LRQLCHAESN NVVATVAVST SVSPAVAQLP  420
F
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2vy1_A1e-1102414012162PROTEIN LEAFY
2vy2_A1e-1102414012162PROTEIN LEAFY
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1190202RRKQVQQERRRRR
Functional Description ? help Back to Top
Source Description
UniProtMay regulate indeterminacy during leaf and flower development.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00095SELEXTransfer from AT5G61850Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.BZU3P
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015937724.10.0protein UNIFOLIATA
SwissprotO485590.0UNI_PEA; Protein UNIFOLIATA
TrEMBLA0A445C1S80.0A0A445C1S8_ARAHY; Uncharacterized protein
STRINGXP_004501760.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF80333346
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.11e-108floral meristem identity control protein LEAFY (LFY)