PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.C56FC

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 216aa MW: 25111.6 Da PI: 9.2472

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.C56FC	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	83.2	4.4e-26	44	130	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fYn+YA++vGF vr+sk ++s+ +++++ r fvC+keg+r ++k++ + r+raetr+gCka+++v+k k+ w+vt + +eH H+la Aradu.C56FC 44 FYNAYATSVGFIVRVSKLSRSRIDNSTIGRIFVCNKEGYRMTDKRE--NVIRQRAETRVGCKAMIMVRKVKSVSWVVTCFIKEHAHPLA 130 9***************************************9988..9999*********************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	9.8E-24	44	130	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 216 aa Download sequence Send to blast
MFLELTAGKV AANLESPRSR IYRNSPVEPY VGQEFESEAE AHVFYNAYAT SVGFIVRVSK 60 LSRSRIDNST IGRIFVCNKE GYRMTDKREN VIRQRAETRV GCKAMIMVRK VKSVSWVVTC 120 FIKEHAHPLA GPGGGRRDFI YEQYPGEWDR IRELNQQLTT EKKRSVTYKR HLEVEHIDVD 180 EYNESLLKKI QHIVYNVKEM ESKEEQSQLN FQSATL

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.C56FC

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015942787.1	1e-159	protein FAR1-RELATED SEQUENCE 1-like
TrEMBL	A0A445BPF8	1e-138	A0A445BPF8_ARAHY; Uncharacterized protein
STRING	XP_007131945.1	3e-92	(Phaseolus vulgaris)
STRING	XP_007150433.1	5e-92	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2453	30	72

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	1e-82	FAR1 family protein