PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.C7X3Q
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 210aa    MW: 23842 Da    PI: 5.0091
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.C7X3QgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR152.41.7e-16116205291
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                   Y+e+A + GF vrk        +   ++r+  C  +g+r++++ +  e+ r++r e+rt+Ckaklk+  +  d++w+v k+  eH+H++ap
  Aradu.C7X3Q 116 AYKEFAWTRGFGVRKGDVGWV--DSVLVRRDIFCHHQGTRSDKHYDrPERVREERLESRTDCKAKLKIYYDVhDNVWRVRKIIDEHSHDMAP 205
                  59**************99988..8999**************9998856778899***************9999***************9975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031018.9E-15116205IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MMNNNSTIPS CHFESDACVI NQKSPIGFNS GQMDFDLYSS DNDEESSEMS LGVYGSSGSS  60
DDDDSTSLFG IGTSHSESNK ESHRSQGEVH GKVPVLLTAE DFLHTVFTSE EEAYNAYKEF  120
AWTRGFGVRK GDVGWVDSVL VRRDIFCHHQ GTRSDKHYDR PERVREERLE SRTDCKAKLK  180
IYYDVHDNVW RVRKIIDEHS HDMAPAAFCN
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.C7X3Q
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020989621.11e-129protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445CC211e-103A0A445CC21_ARAHY; Uncharacterized protein
TrEMBLA0A445D6731e-110A0A445D673_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1719126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.18e-09FAR1-related sequence 11