PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.C7X7Y

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 285aa MW: 32897.9 Da PI: 7.8335

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.C7X7Y	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	52.8	1.3e-16	88	178	1	90
FAR1 1 kfYneYAkevGFsvrkskskks...krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fY +YAk+vGF +r+++++ k+++ +++ + s+eg++e++ k+ + r + t gCk ++ v +++ +++w+v+klel+H+H+++ Aradu.C7X7Y 88 EFYTNYAKKVGFVTRIRNTNFDktrKDSKIPVNQSLHYSREGYQESRVKA---ATRVKRITTAGCKVRMYVMLDRqKDNWMVSKLELKHTHPCF 178 6***********999887664435555568999********999...888889999******9998*************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	5.4E-14	88	177	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence Send to blast
MEQAICEGAS YGTAYDDSDQ YNSCDVNVPS LSEDDTQHVD KEKDFGSVIE AVDDAMAVNH 60 ELPDHTGISL DKIPYVGLRF VSLQRAQEFY TNYAKKVGFV TRIRNTNFDK TRKDSKIPVN 120 QSLHYSREGY QESRVKAATR VKRITTAGCK VRMYVMLDRQ KDNWMVSKLE LKHTHPCFAK 180 QAVHYTEYRK LTMHAKCMRS TQWSESMHTF YGGYLHCKSG LVQFMHEYDN VLGNKQQKEL 240 EDDAADSKGV VPCSSSTTIE RQFQREYTTS KFREVQQEFR KNGIV

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.C7X7Y

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020966746.1	1e-129	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A444ZPS2	1e-130	A0A444ZPS2_ARAHY; Uncharacterized protein
TrEMBL	A0A444ZPS5	1e-125	A0A444ZPS5_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF29282	2	2

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	3e-12	FAR1 family protein