PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.C87QH
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 407aa    MW: 45279.9 Da    PI: 4.4248
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.C87QHgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.11e-18129178255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  +++GVr+++ +g+W+AeIrdp     r  r +lg+++taeeAa  +++a+ +++g
  Aradu.C87QH 129 KFRGVRQRP-WGKWAAEIRDPA----RrVRLWLGTYDTAEEAAMVYDNAAIQIRG 178
                  89*******.**********82....35***********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.6E-29128185IPR001471AP2/ERF domain
SuperFamilySSF541715.75E-21129185IPR016177DNA-binding domain
SMARTSM003804.7E-37129192IPR001471AP2/ERF domain
PROSITE profilePS5103223.341129186IPR001471AP2/ERF domain
PfamPF008472.5E-12129178IPR001471AP2/ERF domain
CDDcd000184.13E-32129185No hitNo description
PRINTSPR003674.9E-10130141IPR001471AP2/ERF domain
PRINTSPR003674.9E-10152168IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042991Biological Processtranscription factor import into nucleus
GO:0048366Biological Processleaf development
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 407 aa     Download sequence    Send to blast
MNSYCYDNND VVMEQSNSIL CKYTVHRTVT NKFTKHNKKS TIEPRTVRVS YTDPDATDSS  60
ADEAEQHFLS SSRKRVKRYI NSIQIEPAST KNAVSAAHNK KRATANAGDA AASCRRPAKA  120
PVTTNGGRKF RGVRQRPWGK WAAEIRDPAR RVRLWLGTYD TAEEAAMVYD NAAIQIRGPD  180
ALTNFITPPQ RGEPQPQPEP QEEEEAETTT AVKPEMKVVV TAEASGSGSG YDSGSEDHRC  240
LNLSSPTSVL QFRSSETESS EQAKKQSFLH CSSDDVSGSG SVSMEEVFGE CQGETSLFEE  300
TGEFLGLEMM PVWDEVFDFQ TPQYPVMFEE EEEKGLFGET KTTSFWCAEE DQELSMENYN  360
SSIVLADSLI DFEKACNPTP TPSSSFCQMD DDYFQDILLA SDPLVLL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A5e-21127193370ATERF1
3gcc_A5e-21127193370ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00456DAPTransfer from AT4G27950Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.C87QH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015934508.10.0ethylene-responsive transcription factor CRF3
RefseqXP_025612783.10.0ethylene-responsive transcription factor CRF3
TrEMBLA0A445BSK00.0A0A445BSK0_ARAHY; Uncharacterized protein
STRINGXP_007137563.11e-123(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45034161
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.11e-52cytokinin response factor 4