PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.C9VJR
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 292aa    MW: 32553.6 Da    PI: 6.5252
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.C9VJRgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.49.6e-20122171255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                   y+G+r+++ +g+W+AeIrdp++    +r++lg+f taeeAa+a++ a+  ++g
  Aradu.C9VJR 122 VYRGIRRRP-WGKWAAEIRDPRK---GARVWLGTFNTAEEAARAYDVAAIHIRG 171
                  69*******.**********954...4**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003803.9E-38122185IPR001471AP2/ERF domain
PfamPF008477.9E-14122171IPR001471AP2/ERF domain
SuperFamilySSF541711.96E-23122180IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.1E-33122180IPR001471AP2/ERF domain
PROSITE profilePS5103225.172122179IPR001471AP2/ERF domain
CDDcd000183.22E-34123181No hitNo description
PRINTSPR003677.6E-12123134IPR001471AP2/ERF domain
PRINTSPR003677.6E-12145161IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008219Biological Processcell death
GO:0009723Biological Processresponse to ethylene
GO:0009735Biological Processresponse to cytokinin
GO:0009753Biological Processresponse to jasmonic acid
GO:0010286Biological Processheat acclimation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0051707Biological Processresponse to other organism
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0005886Cellular Componentplasma membrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
MRNHFSVSLS PLTRISFSHH SKRSKMCGGS IISDFAGVKR GRKLVSQDSW YDELDPFFDF  60
LGFDTAVAAA TNPNNKVQSP LPEIPGDNNN KVAACDEVLG MEKMAVGGAE DKKQPERKLK  120
NVYRGIRRRP WGKWAAEIRD PRKGARVWLG TFNTAEEAAR AYDVAAIHIR GNKAKLNFPN  180
TIKDTGVEVL PLAKKQCLSD ETQFPMLTPI SATFDSDDGS MEGWESNLTQ QMSGLEWLLG  240
LENEQPSQMG GDVFSNNINN NNDSTKNDNN MDLWMLADVV MPNRYAQTFC GQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-231231801573Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00109PBMTransfer from AT3G16770Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.C9VJR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015956635.10.0ethylene-responsive transcription factor RAP2-3
TrEMBLA0A445DPY60.0A0A445DPY6_ARAHY; Uncharacterized protein
STRINGGLYMA09G04630.18e-67(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF48923353
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.19e-37ethylene-responsive element binding protein