PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.CGD8Q
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family SBP
Protein Properties Length: 302aa    MW: 32624.4 Da    PI: 9.2628
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.CGD8QgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP46.97.4e-15871154977
                  EEETTT--SS--S-STTTT-------S-- CS
          SBP  49 fhelsefDeekrsCrrrLakhnerrrkkq 77 
                  fh+l efD++krsCrrrLa+hnerrrk+ 
  Aradu.CGD8Q  87 FHQLPEFDQGKRSCRRRLAGHNERRRKPP 115
                  ***************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031104.0E-886113IPR004333Transcription factor, SBP-box
SuperFamilySSF1036126.08E-1286118IPR004333Transcription factor, SBP-box
PROSITE profilePS5114111.13587114IPR004333Transcription factor, SBP-box
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MASGGRTATN NHKNQPPSST VESLNGLKFG QKIYFEDLGL STPSTTYSTS SSSSAVGVPK  60
KGSLCHALQI PHCHCFWSPT KVLPTVFHQL PEFDQGKRSC RRRLAGHNER RRKPPPSSNF  120
LTSRYARLSS SLFDDSGKGG SFLMEFASYP KLGLRNTVPN PRSSQPSWQG YSETSSDLFL  180
QGSVGGTSIP NLRHPPPLSE SYAGVADSSC ALSLLSSQTW GSSNMAPSLG LNNMLNFSGA  240
PVTQLAASSH GESIHQVPNP WWCSNKVVPD LGLGQFSQLP NSQVPGEFDA LEPGRRHHVN  300
LE
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.CGD8Q
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF3122300.0KF312230.1 Arachis hypogaea squamosa promoter-binding-like protein (SPL9) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015969355.20.0LOW QUALITY PROTEIN: squamosa promoter-binding-like protein 9
TrEMBLA0A445CL711e-177A0A445CL71_ARAHY; Uncharacterized protein
STRINGGLYMA19G32800.11e-106(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF42083359
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42200.12e-22squamosa promoter binding protein-like 9