PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.CM39J
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 111aa    MW: 12349.8 Da    PI: 5.2088
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.CM39JgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR130.61.1e-095199152
         FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkkteker 52
                 kfY++YAk +GFs+r++ ++++   +ei+++  +Cs+egk +++ +  +++ 
  Aradu.CM39J 51 KFYRNYAKAAGFSTRVRCTNRK--GNEIKNQLITCSREGKWKSKISP-TEKT 99
                 6***************998776..8889************9998877.3333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031017.5E-75195IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    Send to blast
MDPSSSDSVL NPGDVDYEFE SNEVPEPLSA VDDELVPKVG MTFTTLEDAG KFYRNYAKAA  60
GFSTRVRCTN RKGNEIKNQL ITCSREGKWK SKISPTEKTN PTAVFRSPLL Q
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.CM39J
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371786e-85HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020992539.13e-69protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_020997160.11e-69protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_020997362.13e-69protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444YDK64e-65A0A444YDK6_ARAHY; Uncharacterized protein
TrEMBLA0A445D2836e-65A0A445D283_ARAHY; Uncharacterized protein
TrEMBLA0A445E3N55e-65A0A445E3N5_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.13e-07FAR1-related sequence 10