PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.CY3QH
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 153aa    MW: 17621.2 Da    PI: 9.6549
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.CY3QHgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR142.32.5e-1379148271
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkke 71 
                   Y+eY++  GF vr+ k++k+kr  ++++ t+ C+++g+ +++  + ++++r++++ tr+gC  ++++k +
  Aradu.CY3QH  79 IYEEYSRVKGFAVRQGKKTKNKRG-KFVRITYLCNRKGFWDKKLLEkQDRKREHKVITRCGCPTEIQIKPR 148
                  59***************9999655.5*************98886653678888999************976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031019.1E-1279148IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    Send to blast
MEDAFVDEAV LDGVKGWRTL PSKRYVKIVQ DMGMEDDEVE VGGGQQSVKN GTNAAEVVTI  60
TANDFLRMEF NNPKEAACIY EEYSRVKGFA VRQGKKTKNK RGKFVRITYL CNRKGFWDKK  120
LLEKQDRKRE HKVITRCGCP TEIQIKPRID TEK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.CY3QH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029144539.11e-78protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445B5X61e-82A0A445B5X6_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9185237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.12e-06FAR1-related sequence 10