PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.CZ64T
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 341aa    MW: 38597.7 Da    PI: 8.7385
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.CZ64TgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR174.81.8e-23110200291
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                   Y+eY++  GF +r+ k+ ++ ++ge+++ t+ C++eg+r+++  + ++++r+++++tr+gC a++++k ++ +gkw+v++++ +HnH+l p
  Aradu.CZ64T 110 LYEEYSRVRGFGIRQGKKIRN-KKGEFVQFTYLCNREGFRDKKWLQmHHRKREHKVVTRCGCPAEMRIKSRDsTGKWYVSRFVDNHNHDLLP 200
                  6****************9999.6777***************998775678888999***************99****************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.5E-21110200IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MDRKFGVFEK CIAVMEGKAL CKKMDNSPTT VVDNVGGISD AFDWLSQTVD SGGYSEDVTL  60
DMGMEYAETT GGAALKQTQD NDNMSVKGIS LTADDIIQIE FSDPKQAAHL YEEYSRVRGF  120
GIRQGKKIRN KKGEFVQFTY LCNREGFRDK KWLQMHHRKR EHKVVTRCGC PAEMRIKSRD  180
STGKWYVSRF VDNHNHDLLP AKDNEDELEF RSSYGTPVIQ TQFPELEKSD ITSLPNSLVL  240
PRWSKMARMD LCRDRHGLQC QATSMHFVPW KGGVNDPISI RTKGTGRGNE PVGSRGIKRR  300
RCSTCGVLGH RRTRCPNGPT PSQQCGQEPD MHPSTKTFEP H
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1294299RGIKRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.CZ64T
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015945326.11e-125protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445B5141e-125A0A445B514_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9185237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.17e-14FAR1-related sequence 12