PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.D958N
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 373aa    MW: 42933.4 Da    PI: 8.566
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.D958NgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR123.71.5e-071512033791
         FAR1  37 kegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  +egk +++    + +++t+++   +C a++ ++  k  g w ++k++l+H+H+++p
  Aradu.D958N 151 REGKWKSK---ISPTEKTNPTAGLNCPARIYIHTLKdVGAWIISKVVLDHSHPCCP 203
                  33333333...4568899**************998879***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031019.6E-6147203IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    Send to blast
MRCSTYVDYT RYITSRVYLT SKFKIFVSFF VFVILRFGCS SSRASFLILL HRSFPLLFSL  60
VCSSFTLPFS LSAIRASFSL LICCFLKSKF ELVLKIMDHS SSDCLLNPDE MDYEFESNEV  120
PEPLSVVDDE LVPKVGMTCR KILQELRQGC REGKWKSKIS PTEKTNPTAG LNCPARIYIH  180
TLKDVGAWII SKVVLDHSHP CCPSKAEMLK QHRELSMSIR RLYEDRHIWV PIYLDHHFWA  240
GMRSTQRSES MHSFFNKYIT RNSSLIQFVK QYDNCLGSRE QAERESDAAD FHTIIPCATK  300
SSIEAQFQDA YTHAKFREVQ AQFRGKANCI TRLKNSALGY SVYEVGEQVS CSIFDKFAVT  360
YDSVAAKAVY QHR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.D958N
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371781e-175HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A445A1M91e-173A0A445A1M9_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.11e-17FAR1 family protein