PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.DB2HS
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 253aa    MW: 28712.2 Da    PI: 4.9494
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.DB2HSgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR177.23.3e-2484175191
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  +fY++Y++  GF +r+ k+ k+ ++gei+++t+ C++eg+r+++  + ++++r+++++t +gC a++++k +  +g w+v++++ +HnH+l p
  Aradu.DB2HS  84 RFYEQYSRAKGFATRQGKKLKN-KKGEIVRYTYLCNREGFRDKKWLEmQDRKREHKVVTGCGCLAEMRIKPKGdSGIWYVSRFVDDHNHDLLP 175
                  5*****************9999.6777***************998875778888999*************9998****************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.4E-2284175IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MGSCSGTVPE FETGGVEPVG GLSGSGEWHC DTLESSPDIG MEAEEEGEPL EDRDEEDNGI  60
SEPVMYSAAE ILKMEFNNPD EASRFYEQYS RAKGFATRQG KKLKNKKGEI VRYTYLCNRE  120
GFRDKKWLEM QDRKREHKVV TGCGCLAEMR IKPKGDSGIW YVSRFVDDHN HDLLPAKFVP  180
YLPSYRKISD AGGFNFVPFT KRGMYNEIRR QRALRNGDVN AALRFFERCE GGMRRCSGGL  240
NLDGCVLIEE EEE
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.DB2HS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025692918.11e-143protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445DE861e-142A0A445DE86_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9185237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.14e-19FAR1-related sequence 10