PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.E5TXD
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family HD-ZIP
Protein Properties Length: 261aa    MW: 29676 Da    PI: 8.0573
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.E5TXDgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox20.96.3e-07941094156
                  HHHHHHHHHHHHHHHH CS
     Homeobox  41 erqVkvWFqNrRakek 56 
                  +rq+ vWFqNrRa++k
  Aradu.E5TXD  94 DRQIAVWFQNRRARWK 109
                  69*************9 PP
2HD-ZIP_I/II65.51.2e-2170145191
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                  ekk+rl++eq+++LE+sF++e kL+               rq+avWFqnrRAR+k+kqlE+ y++Lk+++d +++e+++L++ev +L+  l
  Aradu.E5TXD  70 EKKKRLTNEQLESLERSFQKEIKLD---------------RQIAVWFQNRRARWKAKQLEHLYDSLKQEFDLISKEKQKLQQEVMKLKGIL 145
                  69****************7766664...............9**********************************************9665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466896.42E-1155113IPR009057Homeodomain-like
SMARTSM003895.8E-469115IPR001356Homeobox domain
CDDcd000866.98E-971112No hitNo description
PROSITE profilePS500719.29794111IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.601.0E-795118IPR009057Homeodomain-like
PfamPF021832.0E-7111145IPR003106Leucine zipper, homeobox-associated
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    Send to blast
MDWNNNGSTR SFVPRPDSSF SFLYNYTYTN PYPGIEMKQG GSSAMVEGPS SSTTLSMEKM  60
NNNNNNLMME KKKRLTNEQL ESLERSFQKE IKLDRQIAVW FQNRRARWKA KQLEHLYDSL  120
KQEFDLISKE KQKLQQEVMK LKGILRDHQG CRTTQISNYT EISGGGGGGG DETTVESTSE  180
ALRCSNTNKS SSISRATASI VHNHNNNNNN GNCSFTVEDY NTTVPPTVLP YWPAVPYYPL  240
INYYHYVSAL VSVHLLDDQG N
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1103111RRARWKAKQ
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.E5TXD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020991888.11e-180putative homeobox-leucine zipper protein ATHB-51 isoform X1
SwissprotQ9LZR02e-41ATB51_ARATH; Putative homeobox-leucine zipper protein ATHB-51
TrEMBLA0A445E7331e-119A0A445E733_ARAHY; Uncharacterized protein
STRINGXP_007145270.14e-84(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33943466
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03790.12e-34homeobox 51
Publications ? help Back to Top
  1. Andres RJ, et al.
    Modifications to a LATE MERISTEM IDENTITY1 gene are responsible for the major leaf shapes of Upland cotton (Gossypium hirsutum L.).
    Proc. Natl. Acad. Sci. U.S.A., 2017. 114(1): p. E57-E66
    [PMID:27999177]
  2. Vuolo F, et al.
    LMI1 homeodomain protein regulates organ proportions by spatial modulation of endoreduplication.
    Genes Dev., 2018. 32(21-22): p. 1361-1366
    [PMID:30366902]