PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.EFI0B

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 148aa MW: 17022.4 Da PI: 7.4588

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.EFI0B	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	53.3	9.4e-17	51	137	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 kfY++Y+k +GFs+r+++++k+ ++ei+++ +Cs+e k + + + +++t+++ +C+ak+ ++ k g+w ++k++l+H H+++p Aradu.EFI0B 51 KFYKDYSKAAGFSTRVRSTNKK--ENEIKNKLITCSREEKWKLKISP---TEKTNPSAGLNCTAKIYIHILKdIGVWIISKVVLHHLHPCCP 137 6**************98887..7779*******99998777...899************98879************9986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	6.0E-14	51	137	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 148 aa Download sequence Send to blast
MDYLTSNCQL NQSEVDFEFE SNEVLEPLYG VDEQFVPKVG MTFNTLEDAA KFYKDYSKAA 60 GFSTRVRSTN KKENEIKNKL ITCSREEKWK LKISPTEKTN PSAGLNCTAK IYIHILKDIG 120 VWIISKVVLH HLHPCCPNQA ELLKQHRD

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.EFI0B

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020997160.1	2e-79	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A445BA58	2e-83	A0A445BA58_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.1	1e-09	FAR1-related sequence 4