PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.EGP2W

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

G2-like

Protein Properties

Length: 370aa MW: 42332.9 Da PI: 6.8783

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.EGP2W	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.5	1.1e-31	97	150	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH +Fv+ave+LGG+e+AtPk +l+lm+v gL+++hvkSHLQ+YR+ Aradu.EGP2W 97 PRLRWTPELHLSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRS 150 8****************************************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	6.8E-30	93	151	IPR009057	Homeodomain-like
PROSITE profile	PS51294	12.218	93	153	IPR017930	Myb domain
SuperFamily	SSF46689	7.53E-15	95	151	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.5E-22	97	152	IPR006447	Myb domain, plants
Pfam	PF00249	2.7E-9	98	149	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 370 aa Download sequence Send to blast
MSKEYADEII IEEDEETSSL GCCSQKCSSF DLNEEASSEE EEEEGGKNKK EEDEAACDEE 60 EINANGTSNS REDEGNNNNK NNERRGGVRQ YVRSKMPRLR WTPELHLSFV HAVERLGGQE 120 RATPKLVLQL MNVRGLSIAH VKSHLQMYRS KKLDETGQVL GQTYRSRQLH EVVGRSRNHH 180 ELLNPHHHFK MGNGGIILAT NFNHHHHFQG SLMPHHHHPH FSLSSRLRVT SNEIVSSSSN 240 HQGRSSSNQV QVMDTSCRIA PIRPSHFLEE KKWPPLEIMN NHHQWKFKGP TTIGNIPESV 300 QPSIREYLST SKNNLRLEFD PPFRIKLNEV KREKREERLP NLQLGLSHGG DGSDDDCRET 360 QEISTKLSLS

Sequence ? help Back to Top

Protein Sequence Length: 370 aa Download sequence Send to blast

MSKEYADEII IEEDEETSSL GCCSQKCSSF DLNEEASSEE EEEEGGKNKK EEDEAACDEE  60
EINANGTSNS REDEGNNNNK NNERRGGVRQ YVRSKMPRLR WTPELHLSFV HAVERLGGQE  120
RATPKLVLQL MNVRGLSIAH VKSHLQMYRS KKLDETGQVL GQTYRSRQLH EVVGRSRNHH  180
ELLNPHHHFK MGNGGIILAT NFNHHHHFQG SLMPHHHHPH FSLSSRLRVT SNEIVSSSSN  240
HQGRSSSNQV QVMDTSCRIA PIRPSHFLEE KKWPPLEIMN NHHQWKFKGP TTIGNIPESV  300
QPSIREYLST SKNNLRLEFD PPFRIKLNEV KREKREERLP NLQLGLSHGG DGSDDDCRET  360
QEISTKLSLS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4r_A	2e-17	98	152	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B	2e-17	98	152	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C	2e-17	98	152	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D	2e-17	98	152	3	57	Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.EGP2W

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015942990.1	0.0	putative Myb family transcription factor At1g14600
TrEMBL	A0A445BBY0	0.0	A0A445BBY0_ARAHY; Uncharacterized protein
STRING	GLYMA05G29161.1	1e-121	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF3012	32	70

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	2e-36	G2-like family protein