PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.F0RU3
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 127aa    MW: 14550.1 Da    PI: 4.4921
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.F0RU3genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR126.61.9e-085295247
         FAR1  2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47
                  Y++YAk +GFs+r+++++++   +ei+++  +Cs+eg+ + +  k
  Aradu.F0RU3 52 VYRNYAKAAGFSTRVRSTNRK--GNEIKNQLITCSREGNGNLNYLK 95
                 7***************98887..8889***********98877655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031018.7E-65295IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    Send to blast
MDDSTSDCQL NPSEVDYEFE SNEVPEPLSV VDDQFVPKVG MTFTILEDAG KVYRNYAKAA  60
GFSTRVRSTN RKGNEIKNQL ITCSREGNGN LNYLKQYREL SMSIRRTIEN NEEAGLYNIY  120
INQCQYP
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.F0RU3
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020997160.13e-55protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444X2N71e-58A0A444X2N7_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.12e-06FAR1-related sequence 10