PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.FL3HF

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 219aa MW: 25646.1 Da PI: 8.8699

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.FL3HF	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	50.8	5.5e-16	51	137	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 kfY++YAk + Fs+r+++++k+ ++i+++ +Cske k +++ + +++t+++ +C a++ ++ k g w ++k++l+H+H+++p Aradu.FL3HF 51 KFYKDYAKAANFSTRVQSTNKK--GNKIKNQLITCSKEEKWKSKISP---TEKTNPTAGLNCLARIYIHTLKdVGAWIISKVVLHHSHPCCP 137 6**************98887..77799*****999998776...8999**********998879*************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	7.4E-13	51	137	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 219 aa Download sequence Send to blast
MDDSTSDYQL NQDKVDFEFE SNEVPEPLSI VDDQLVPKVG MTFKTLEDAA KFYKDYAKAA 60 NFSTRVQSTN KKGNKIKNQL ITCSKEEKWK SKISPTEKTN PTAGLNCLAR IYIHTLKDVG 120 AWIISKVVLH HSHPCCPTQA EMLKQHRELS MSFRRTIENN EEADRHIWVL IYLDHQFWAR 180 MKSTQRSESM HSFFNKFITR NSSLIQFVKQ YDNFLRSRE

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.FL3HF

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HQ637178	1e-142	HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020992539.1	1e-100	protein FAR1-RELATED SEQUENCE 5-like
Refseq	XP_020997160.1	1e-101	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A444YSY6	1e-138	A0A444YSY6_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	8e-09	FAR1-related sequence 5