PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.FY3DY
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 114aa    MW: 13222 Da    PI: 9.7209
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.FY3DYgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR132.33.3e-1059104147
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk 47 
                  kfYn+Y++  GF +r+ k+ k+  +ge +++tfvC+++g+r+++  k
  Aradu.FY3DY  59 KFYNDYSRVKGFATRQGKKIKN-ISGENIRYTFVCNRKGFRHRSGWK 104
                  6*****************9998.8999**************987655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.0E-759102IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 114 aa     Download sequence    Send to blast
MDDDAGVSLF CLTHRVLDLG GGGHADIVGP YEEWWSKYEA IKAEEVLRME FSSPEEARKF  60
YNDYSRVKGF ATRQGKKIKN ISGENIRYTF VCNRKGFRHR SGWKRAIVRE STRL
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.FY3DY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016206768.12e-51protein FAR1-RELATED SEQUENCE 12-like
TrEMBLA0A444YQY22e-45A0A444YQY2_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9185237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18960.15e-07FAR1-related sequence 12