PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.G13NV
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family B3
Protein Properties Length: 215aa    MW: 25509.5 Da    PI: 10.6729
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.G13NVgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B341.91.8e-1312891799
                 E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
           B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                  lp kf+e++g++   s  l l+ ++g +W+v+   ++++g+++++kGWk Fv    L+ g  + F+++   + ++ v +f++
  Aradu.G13NV 12 KLPIKFTEKYGSS--LSNPLYLKPLDGTEWRVEW--TNHDGGILFKKGWKAFVAYYSLDHGHLLWFEYNI-GTSHMEVYIFDT 89
                 69********977..6778***************..*******************************963.556679999987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5086311.773190IPR003340B3 DNA binding domain
SMARTSM010190.0036790IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.107.0E-161191IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019365.1E-161296IPR015300DNA-binding pseudobarrel domain
PfamPF023621.2E-101289IPR003340B3 DNA binding domain
CDDcd100174.06E-111388No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    Send to blast
MVANTRFITL QKLPIKFTEK YGSSLSNPLY LKPLDGTEWR VEWTNHDGGI LFKKGWKAFV  60
AYYSLDHGHL LWFEYNIGTS HMEVYIFDTS CLQIEYAAND QIKEQLLRRS KRNRRRKDSK  120
SPVRLSPTRP ESMKEAKKFK WEKPSFIKIT QRSQTRAPCS LFKPVTHGIQ LTVIPLSWIK  180
DSDPRKSRPN LSVIFYRKYF KKNQQDVKLQ FRKES
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.G13NV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015934490.16e-73B3 domain-containing protein Os12g0591400-like
TrEMBLA0A444ZSW07e-60A0A444ZSW0_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9834369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-12B3 family protein