PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.G3TTV
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Trihelix
Protein Properties Length: 381aa    MW: 43469.1 Da    PI: 4.6467
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.G3TTVgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix36.11.7e-1129104277
     trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsesss 77 
                  Wt  e+l L++    +e + +++ +  ++W  ++ ++++  + r+  qC+ kw++l  +y++i+++e+++++++++
  Aradu.G3TTV  29 WTVTETLILVNEIAAVEADCSTALSSYQQWNIIAGNCAALDVGRNMGQCRRKWDSLLSDYQRIRAWEEEESKKKRK 104
                  ********************************************************************99766654 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138372.8E-827100No hitNo description
PROSITE profilePS500906.6552985IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009506Cellular Componentplasmodesma
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    Send to blast
MTDTNNAKND DVDDDAVIRR TRSQAAPDWT VTETLILVNE IAAVEADCST ALSSYQQWNI  60
IAGNCAALDV GRNMGQCRRK WDSLLSDYQR IRAWEEEESK KKRKKNNARG ACSYWALKGE  120
RVRTLRLPED FDRELYRAVD EVVRAREERG EVLVESDNEE ARNEVLDVTV EIGSKRKRQR  180
SKSERQPEDK HKKCIPVESS GDQSREHDQR GCHVQMSNEN HEEELEKHDS DDEYLKDFLE  240
DKSKSKSKAE RTPKDKLEIS VKTLAEVELQ ENDDTETPKP TCLEKVASSS REENEETMAL  300
KLVTSSSREE NEETAALKLQ ELAVKIQAIC NESADCQAAG SQNVEDYLTE FTRCQGDKLI  360
ENLATFADIL KKLCGLLQEC K
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1100104KKRKK
2174179KRKRQR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.G3TTV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015971821.10.0trihelix transcription factor ASR3
TrEMBLA0A445CVR60.0A0A445CVR6_ARAHY; Uncharacterized protein
STRINGXP_004498559.11e-101(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67322633
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31270.13e-40sequence-specific DNA binding transcription factors