PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.G8BZQ
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 186aa    MW: 21254.7 Da    PI: 8.4815
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.G8BZQgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR141.54.4e-13111181171
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkke 71 
                  +fY + +k  GF vrk    k  +ng+ ++r+f C++ g r+e++ +  +++r +++etrt+C+akl + ++
  Aradu.G8BZQ 111 EFYLRLGKCHGFGVRKGDYGKD-ENGNLIRRRFFCNRAGLRDEKHYArLDRKRIHKPETRTNCEAKLSIYLD 181
                  69***************98887.8999***************999885678888*************99876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.7E-11111181IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    Send to blast
MCWRRLVGFT RECAVLRSTE AGRDCHRSRT AGGGTLISHM GISRFVPTNS RDGYHKGDAR  60
CDPGNQTDDS AEFDVMNEDS DEEASGYGDV LGLTAEDINR MVFRTEQRAY EFYLRLGKCH  120
GFGVRKGDYG KDENGNLIRR RFFCNRAGLR DEKHYARLDR KRIHKPETRT NCEAKLSIYL  180
DRGTSN
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.G8BZQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025702657.11e-100protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445D8J01e-95A0A445D8J0_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15343210
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.17e-08FAR1-related sequence 10