PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.G8KNY
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family CAMTA
Protein Properties Length: 993aa    MW: 110098 Da    PI: 5.966
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.G8KNYgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1180.91.5e-56141293117
         CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcy 99 
                  +e ++rwlk+ e++ iL+n++k+++t+e++++p+sgsl+L+nr+++r+fr+DG++w+kkkdg+tv E+he+LKvg+ve+l+cyYah+e+nptfqrr+y
  Aradu.G8KNY  14 QEaQSRWLKPVEVMYILQNHDKYQFTQEPPQQPTSGSLFLFNRRVLRFFRRDGHNWRKKKDGRTVGEAHERLKVGTVEALNCYYAHGEQNPTFQRRSY 111
                  5669********************************************************************************************** PP

         CG-1 100 wlLeeelekivlvhylev 117
                  w+L+ ++e+ivlvhy+e+
  Aradu.G8KNY 112 WMLDPAFEHIVLVHYRET 129
                  ****************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143783.6169135IPR005559CG-1 DNA-binding domain
SMARTSM010766.2E-7712130IPR005559CG-1 DNA-binding domain
PfamPF038591.6E-4815128IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.108.7E-9426515IPR013783Immunoglobulin-like fold
CDDcd001028.50E-5427511No hitNo description
PfamPF018331.6E-8428510IPR002909IPT domain
SuperFamilySSF812962.1E-17428511IPR014756Immunoglobulin E-set
Gene3DG3DSA:1.25.40.202.0E-16621718IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029715.273623727IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484039.95E-17625717IPR020683Ankyrin repeat-containing domain
CDDcd002041.11E-13628715No hitNo description
PfamPF127962.4E-8643718IPR020683Ankyrin repeat-containing domain
SMARTSM002480.0071656685IPR002110Ankyrin repeat
PROSITE profilePS5008810.606656688IPR002110Ankyrin repeat
SMARTSM00248940695724IPR002110Ankyrin repeat
SMARTSM00015110773795IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.584774803IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525403.72E-8822877IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000150.45830852IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.444831860IPR000048IQ motif, EF-hand binding site
PfamPF006120.025833851IPR000048IQ motif, EF-hand binding site
SMARTSM000152.7E-5853875IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.212854879IPR000048IQ motif, EF-hand binding site
PfamPF006123.0E-5856875IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 993 aa     Download sequence    Send to blast
MATGDDYNID DLFQEAQSRW LKPVEVMYIL QNHDKYQFTQ EPPQQPTSGS LFLFNRRVLR  60
FFRRDGHNWR KKKDGRTVGE AHERLKVGTV EALNCYYAHG EQNPTFQRRS YWMLDPAFEH  120
IVLVHYRETS EGRSSSGPGT QLSPSSSSAF GQSPSSYSAQ TPLSTSVLGD PYEPNQSYSS  180
SGTGEVTSDV FIMNDGMSHL DGTYADSGTS TEVEVTRALL RRLEEQLSLN EDSIKEIASF  240
YGEKEITGDS NAQQNQGLTC KQEESAAFAR PDDYGLIFYG HNGTQDEGDK SYELMDHTYR  300
DGNEKDIWTE VLESCKSSST ARLPQKNVYM PAGKYLKQEN SPSSSRKEPI ANQDDSHWLN  360
FNSNNTENSV FSLPEGDSGV EYPPYSSVLE AQKANSEYYA TLFAQSQIGP SLDADSSLTV  420
SQKQKFSIKA VSPEWGYTTE TTKIIIVGSF LCHPSDSAWA CMFGDVEVPI EIIQDGVISC  480
EAPSRLSGKV NLCITSGNRQ SCSEVREFEY RNKTSICTYC NSSATEANRS PEELLLLVRF  540
AQMLLSGSTT KNDDIESGTH LVKQKADDDS WSHIIEALLV GSGTSSGMVD WLLEELLKDK  600
LQLWLSCRSQ EKDEVTGCCL SKKEQGIIHM LAGLGFEWAL HPILSCGVNI NFRDINGWTA  660
LHWAARFGRE KMVASLIACG ASAGAVTDPS AQDPKGKTAA SIAASSGHKG LAGYLSERAL  720
TSHLSSLTLQ ESELSKSSAQ FEADLAVSSV SKENLAAGED QAPLKHTLAA VRNATQAAAR  780
IQSAFRSHSF RKRRAREAAA ATAGGINAGS IGNIPELSAM SKLAFRNSRD HNSAALSIQK  840
KFRGWKGRKD FLELRQKVVK IQAHVRGYQV RKHYKVIWAV GILDKVVLRW RRKGAGLRGF  900
RQEMETSALD ESEDEDILKP FRKQMVDAEI KEAVSRVLSM VDSPDARQQY HRMLEKYRQA  960
KAELAGTSEE ASLSTSIADV FSMEDDMYQF PQG
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved together with CAMTA2 and CAMTA3 in the positive regulation of a general stress response (PubMed:25039701). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:25039701, ECO:0000305|PubMed:11925432}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.G8KNY
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By heat shock, UVB, salt, wounding, ethylene, methyl jasmonate, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by cold stress (PubMed:28351986). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:28351986}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015958017.10.0calmodulin-binding transcription activator 4 isoform X4
SwissprotQ9FYG20.0CMTA4_ARATH; Calmodulin-binding transcription activator 4
TrEMBLA0A444ZS000.0A0A444ZS00_ARAHY; Uncharacterized protein
STRINGGLYMA05G28090.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45482950
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.10.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains
Publications ? help Back to Top
  1. Benn G, et al.
    A key general stress response motif is regulated non-uniformly by CAMTA transcription factors.
    Plant J., 2014. 80(1): p. 82-92
    [PMID:25039701]
  2. Kidokoro S, et al.
    Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature.
    Plant Cell, 2017. 29(4): p. 760-774
    [PMID:28351986]