PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.G8ZY2
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 436aa    MW: 50171.1 Da    PI: 9.3148
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.G8ZY2genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR156.68.5e-1851136190
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                  +fY++YAk +GFs+r+ +++k+   +ei+++  +Cs+egk +++ ++   +++t+++   +C a++ ++  k    w ++k++l+H+H+++
  Aradu.G8ZY2  51 RFYKDYAKAAGFSTRVWSTNKK--GNEIKNQLITCSREGKWKSKISS---TKKTNPTAGLNCPARIYIHTLKdVRAWIISKVVLHHSHPCC 136
                  5***************998877..8889**************99877...999***************9988799*************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031015.4E-1551136IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 436 aa     Download sequence    Send to blast
MDDSTSDCQL NQGEVDFEFE SNEVLDPLCV VDDQLVPKVG MTFKTLEDAA RFYKDYAKAA  60
GFSTRVWSTN KKGNEIKNQL ITCSREGKWK SKISSTKKTN PTAGLNCPAR IYIHTLKDVR  120
AWIISKVVLH HSHPCCSTQA EMLKQHRKLS MSIRRTIENN EKAGMRSTQK SESMHSFFNN  180
SLIQFVKQYD NCLGSREQVE RESDATDFYT FREVQAQFRE KANCITRLTN FALGYSVYEV  240
GEQVSNSIFN KFVVTYDSVA AEVKCQCLLF ESRGILRRHA LSVLSFERVS QVSPRYILER  300
WSKKVKRRYT HIKSNHDETL LEPRSKRFVE LIFHSQNICE FTSESEELTA ILHRAYDNVM  360
VEMEELKAKR KGTCLLSHED ANLESVNELQ SPPRVRTRGR PKNRLGSKLD KQITNASKKK  420
KTKALNELNL FDAASV
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.G8ZY2
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371780.0HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020986710.11e-164protein FAR-RED ELONGATED HYPOCOTYL 3-like
TrEMBLA0A445A1M90.0A0A445A1M9_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22170.26e-16far-red elongated hypocotyls 3