PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.G9G5G

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

GeBP

Protein Properties

Length: 116aa MW: 12784.5 Da PI: 10.0362

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.G9G5G	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	33.3	1.4e-10	5	58	43	97
DUF573 43 ksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 + i +++s l eKir+LKkKf+++ +k k+gk + k+h+ ++++l k +Wg Aradu.G9G5G 5 NLIRANASCMKLKEKIRQLKKKFENNLEKEKNGKG-TTLKPHELEALQLGKNVWG 58 5688999999*****************888887.6779************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	1.3E-9	7	58	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 116 aa Download sequence Send to blast
MKGSNLIRAN ASCMKLKEKI RQLKKKFENN LEKEKNGKGT TLKPHELEAL QLGKNVWGHD 60 GCGGETVLNE TAKKDTVNNE KAAKITSKKA LVPHSNEKAE AKSKLNSEPL DSNEDS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.G9G5G

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015945400.1	5e-76	uncharacterized protein LOC107470510
Refseq	XP_029145238.1	6e-75	probable transcription factor At1g61730
TrEMBL	A0A445B4W7	9e-74	A0A445B4W7_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1831	34	90