PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.GA1C4
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 177aa    MW: 20604.9 Da    PI: 4.7617
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.GA1C4genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR129.42.6e-09105173272
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek 72 
                  fYn Y k+ GF v++ +s+++  n+e t++ f   ke   +  + + +++r+ ++etr+gC+a+++ + +k
  Aradu.GA1C4 105 FYNLYTKMNGFAVQRYRSRSN-LNNELTQQSFGFRKERMCDGVEVA-DRKRKLKPETRCGCEAEIHTHVNK 173
                  9***************99888.67779*****99999888887777.99****************988776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.8E-6105173IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    Send to blast
LKRLEVKELE YYSKESVRTL DPVQGLHVDG EGSDVREEGS EEFKGHEGFE AESEIHDEFG  60
DGFYDNWEEK AINEIADLDC MNPKKITVEV IKSVHLSDWE IAFLFYNLYT KMNGFAVQRY  120
RSRSNLNNEL TQQSFGFRKE RMCDGVEVAD RKRKLKPETR CGCEAEIHTH VNKDSDK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.GA1C4
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020963754.16e-73protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445DXI21e-118A0A445DXI2_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2951522