PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.GB4U4
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 491aa    MW: 55009.3 Da    PI: 4.4362
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.GB4U4genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.29.5e-1974130255
          AP2   2 gykGVrwdkkrgrWvAeIrdpseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr++  +g+WvAeIr+p +n    k+ kr +lg+f ta+eAa a+++a+k ++g
  Aradu.GB4U4  74 RYRGVRQRI-WGKWVAEIREPISNHeskKNaKRLWLGTFTTAFEAALAYDKAAKTMYG 130
                  59****998.**********65544576669***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.5E-2774139IPR001471AP2/ERF domain
PfamPF008476.0E-1374130IPR001471AP2/ERF domain
SMARTSM003808.2E-3474144IPR001471AP2/ERF domain
PROSITE profilePS5103221.87874138IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-1874138IPR016177DNA-binding domain
CDDcd000181.44E-2774140No hitNo description
PRINTSPR003677.2E-97586IPR001471AP2/ERF domain
PRINTSPR003677.2E-9104120IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 491 aa     Download sequence    Send to blast
MATEIVSGNR NSSKRRRCGS DSLEDTLEKW KKKNSDIQHD FSTNGVHVVH KVPAKGSKKG  60
CMKGKGGPQN SEFRYRGVRQ RIWGKWVAEI REPISNHESK KNAKRLWLGT FTTAFEAALA  120
YDKAAKTMYG SGARLNFPEH DLESVGSEES PSKNGIIFSG EAPKAEDLDG NFHQFCEDKP  180
NFSDVEALEG TKEEDHDVQE NEKCDDASVV HKEMKDIEAK IPGESEGIEG ESEEVLKCSG  240
SGVEFTDMAM NSGADGTASD ANEHEIVANN IEVPIEESTK SLTSSCDLSN IDNHCDDYFN  300
NQISDEDCNP KPNYDQSNIK NEAYMVKKKH VEEVISEILR LYSNKCSNNC IQSQNENDEN  360
QPSVNAEEEK PLMPVEADMV QTCNCYGCDN SDDEIKNEPN GSDDNVGEMY EFQALNSNID  420
RKLELQEKGD DGNVLSEFSS KHNRKLCEHL NNMQVASIEM DHDYSFLRPD YDFGLLEEQK  480
LLDLCFSHLG S
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A4e-1975138360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A5e-1975138663ATERF1
3gcc_A5e-1975138663ATERF1
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.GB4U4
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015950522.10.0uncharacterized protein LOC107475407
RefseqXP_025655868.10.0uncharacterized protein LOC112751071
TrEMBLA0A445EA830.0A0A445EA83_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF132862127
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.29e-32DRE-binding protein 2A