PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.GG1YT

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 241aa MW: 27933.8 Da PI: 8.0711

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.GG1YT	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75.6	1e-23	86	176	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 Y+eY++ GF vr+ k+ k+ + ge+++ t+ C++eg+r+++ + ++++r+++++tr+gC a++++k + +gkw v++++ eHnH+l p Aradu.GG1YT 86 IYEEYSRVKGFAVRQGKKIKN-KRGEFVQITYLCNREGFRDKKWLEkQDRKREHKVVTRCGCPAEMRIKPRIgTGKWFVARFVDEHNHDLLP 176 6**************9999.5566**********9997663678888999*********9999**************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	1.1E-21	86	176	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence Send to blast
MKEVLGSWIE GAFADEAVLE RVSERLRDVA FEEEIVQDMG MEDDEVEVGG GQQSIENGME 60 AAEVVTITAD DFLRMEFNNP KEAARIYEEY SRVKGFAVRQ GKKIKNKRGE FVQITYLCNR 120 EGFRDKKWLE KQDRKREHKV VTRCGCPAEM RIKPRIGTGK WFVARFVDEH NHDLLPQKFV 180 EYLPAHRKIS DVDIAHMDSL RQVGISIPKI YKSIAAQAGG FNRVSFTKRD MYNEVRRQRS 240 L

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.GG1YT

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020997365.1	1e-179	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A445DBQ9	1e-169	A0A445DBQ9_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF9185	2	37

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-23	FAR1-related sequence 5