PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.GG3LG
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family AP2
Protein Properties Length: 658aa    MW: 73155.4 Da    PI: 6.8184
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.GG3LGgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP229.71.6e-09396447155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  s+y+GV+  +++gr++A+++d    +  k+  + + g+ gt eeAa+a++ a+ k++g
  Aradu.GG3LG 396 SQYRGVT--RWTGRYEAHLWD----NscKKeGQTRKGRQGTQEEAAEAYDVAAIKFRG 447
                  78****7..48*******999....3354569999********************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.05E-9396457IPR016177DNA-binding domain
CDDcd000183.44E-16396457No hitNo description
SMARTSM003803.3E-18397461IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.8E-10397455IPR001471AP2/ERF domain
PfamPF008473.2E-4397447IPR001471AP2/ERF domain
PROSITE profilePS5103213.63397455IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 658 aa     Download sequence    Send to blast
MKSFLNDGNN TTTTTTTNHD DDSNNHNWLM GFSLSPHHHH NMKMEVPNDH NHNHHHHHHH  60
HQYYHHLHHP SSTASTPSSL FYLSPSQLNN ASSTMCYAEN PSPFHSSPSL AMMPLKSDGS  120
LCIMEALTTS QTQVMVPSSS CSSPKLEDFL GGATMGAHEY GEHEREAMAL SLDSIYYNTN  180
TNNSHHHHHH HQNSEAENNN RQQHCSSNSS LDLILSDPFK QQGHNSNNHH HEHDHDVNQY  240
YSALGCSNDG STSILPFVEE EEEETTKEPH HHHHQHQMHQ EQENNNCFIR NWVNGNNNNN  300
NNGMVESVNV NVNGGGGNLK TLSLSMSPGC SSTSQSSSSH VSVSTTHNHN QITAGSSSNS  360
CKAMVEVAKN NKRGHNNSSK QTVHRKSIET FGQRTSQYRG VTRWTGRYEA HLWDNSCKKE  420
GQTRKGRQGT QEEAAEAYDV AAIKFRGVNA VTNFDISRYD VERIMASNTL LAGELARRNN  480
NEQPKAIEAV PAPAPATTLE YNVVTSHINK KKELVEVEGC NTNSNNIENG SDEWKKIGFN  540
DDYRNCQNFC GGGALQDLIG IQNPNMGGTH FSNPSSLVTS LSNSSREGSP VHMNKNNNSS  600
HHQNVFHQKV NNNNVLSPII VANNTSTTSV VSSWFPSPPL QIRSTMSPMP IFAAWTEP
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.GG3LG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015972530.10.0AP2-like ethylene-responsive transcription factor ANT isoform X2
TrEMBLA0A444YW000.0A0A444YW00_ARAHY; Uncharacterized protein
STRINGGLYMA0041S50.16e-92(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF91634114
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.14e-29AP2 family protein