PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.GZK0F
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 169aa    MW: 19783.9 Da    PI: 10.8905
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.GZK0FgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR138.15.1e-121181176
         FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkw 76
                 kfY++Y+k +GFs++++++++   +++i+++  vCs+eg+ +++++    + + +++   +C a++ v+ +kd + 
  Aradu.GZK0F 11 KFYKHYSKLAGFSTKIRNTTRD--EDKIKNQLIVCSREGRWKSKRSP---TLKANPSAGLNCPARIYVHIMKDTRL 81
                 6****************98877..7779************9998766...8999***************9987765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031016.6E-91182IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    Send to blast
MIFKTLEEAG KFYKHYSKLA GFSTKIRNTT RDEDKIKNQL IVCSREGRWK SKRSPTLKAN  60
PSAGLNCPAR IYVHIMKDTR LRCSNNTGSL ACSCIAPSKP TRKPELNRIP VYLDHHFWAG  120
MRSTQRSESM HSFFNKFITR NRSLRQFVKQ YDNCLASRER IRCCRFSHM
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.GZK0F
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A445AYG31e-66A0A445AYG3_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.12e-09FAR1 family protein