PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.H33XQ
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 149aa    MW: 17373.4 Da    PI: 8.204
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.H33XQgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR161.91.9e-1961148288
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 
                  +Y +YAk+vGF+vrk       ++g+ ++r+f C+k g+ree+  +  + +r+++aetrtgC+akl + +++ +++w+v kl +eHnH+
  Aradu.H33XQ  61 CYVSYAKSVGFRVRKGDVICG-KHGKYKRRRFFCNKVGHREEKYYNnPNWKREHKAETRTGCEAKLSMYLDEsSSVWRVRKLLEEHNHD 148
                  7***************99988.6677****************988846778999***************9999***************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.1E-1761148IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    Send to blast
MNIEGEATYF ESDEGGQNMK ETQENVSCTC ACRGGSRYCG VLTTEDIRNH SWMTSDAVYE  60
CYVSYAKSVG FRVRKGDVIC GKHGKYKRRR FFCNKVGHRE EKYYNNPNWK REHKAETRTG  120
CEAKLSMYLD ESSSVWRVRK LLEEHNHDS
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.H33XQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020999392.11e-108uncharacterized protein LOC110281462
TrEMBLA0A445BGT75e-81A0A445BGT7_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2955122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.18e-10FAR1-related sequence 11