PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.H8Q7N
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 455aa    MW: 51806.9 Da    PI: 7.1979
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.H8Q7NgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR155.81.5e-17166252191
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  kfY +YAk +GFs+r+++++++   +ei+++  +Cs+egk +++ +     ++t++    +C a++ ++  k  g w ++k++l+H+H+++p
  Aradu.H8Q7N 166 KFYGNYAKAAGFSTRVRSTNRK--GNEIKNQLIRCSREGKWKSKISP---IEKTNPAAGLNCPARIYIHTLKdVGAWIISKVVLDHSHPCCP 252
                  6****************98887..8889*************998877...999***************998879***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031019.7E-15166252IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 455 aa     Download sequence    Send to blast
MDTGVLFYEI DPLYIHEDPV RGEYYIYCAP IHESPPAPFV LDEWGVPVLP PELDPLPEPI  60
EPPVFDEQQG HEYDQIMEAP PPSPDCIFDD DEPGEAPAGE HRPVVFREKS SAYKRLGLVS  120
ITSQLTTNPP KRASSVTSLT RHLSVVDDQF VPKVGMTFTT LEDTEKFYGN YAKAAGFSTR  180
VRSTNRKGNE IKNQLIRCSR EGKWKSKISP IEKTNPAAGL NCPARIYIHT LKDVGAWIIS  240
KVVLDHSHPC CPSKAEMLKQ HRELSMSIRR TIENNEEASI KPSKTYQSFV AAAGVCVWVY  300
SADLYEDRHI WVSIYLDHHF WAGMRSTQRS ESMHSFFNKF LTRNISLIQF FKQYDNYLES  360
REQAERESDA ADFHTVIPCA TKSSIEAQKV QAQFREKANC ITRLTNSALG YSVYELNIQQ  420
VCGYLRLSGS RGKMPMLIIR VKRDIVPSHT KRVKL
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.H8Q7N
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371780.0HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A444ZDY11e-178A0A444ZDY1_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.15e-11FAR1-related sequence 5