PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.HIG8A
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 203aa    MW: 22568.8 Da    PI: 8.9379
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.HIG8AgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR125.64e-08119167257
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtrae 57 
                  +Y++YAk +GFs+r++ ++++   +ei+++  +Cs++gk +++ +      +++++
  Aradu.HIG8A 119 CYRNYAKAAGFSTRVRCTNRK--GNEIKNQLITCSRKGKWKSKISP-----TEKTN 167
                  7**************998776..8889************9998877.....22222 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.8E-5119166IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    Send to blast
FVFVILRFGC SSSRASFLIL LHRSFSLLFS LVCSSFTFSF SLSATRASFS LLICCFLKSK  60
FELVLKMMDP SSSDFVLNPG DVDYEFESNE VPEPLSVVDD ELVPKVGMTF TTLEDAGKCY  120
RNYAKAAGFS TRVRCTNRKG NEIKNQLITC SRKGKWKSKI SPTEKTNPTA GCAGSFTPLL  180
SKQSRDAQTA QGTKHVHSSY DRE
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.HIG8A
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371785e-84HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020992539.11e-72protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444ZDD62e-77A0A444ZDD6_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.15e-06FAR1-related sequence 10