PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.HX3MN

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 221aa MW: 25550.6 Da PI: 4.4762

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.HX3MN	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	50.1	8.9e-16	74	160	1	86
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHn 86 +fYn+Y+ GF +rk+ + ++g+i++r++vC+keg r+ + + +e++r+ r+ trt+C a l+vk+++ g+w+ t ++ Hn Aradu.HX3MN 74 QFYNAYSCWHGFIIRKDDVVRD-NQGRIISRQLVCNKEGWRNMRYLDlDERSREARSLTRTKCPAWLRVKLDYgCGRWKNTLIDFIHN 160 6**************99998.8888************99887889999***************9999888887777 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	4.1E-14	74	160	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 221 aa Download sequence Send to blast
MSIKEDDVKN DSDNDLGDDF DYQPNAEDDA KDNDVDSLDS TIKSEEVCGV KRIADLMVED 60 IWSLEFRTED EACQFYNAYS CWHGFIIRKD DVVRDNQGRI ISRQLVCNKE GWRNMRYLDL 120 DERSREARSL TRTKCPAWLR VKLDYGCGRW KNTLIDFIHN LDRALKEYRN NELIADFKSQ 180 CSEPVMITSL ERAGALNIKV LSTTLDKVEF SVTALGEPAK D

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.HX3MN

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HQ637177	0.0	HQ637177.1 Arachis hypogaea clone AHF-303L13 NBS-LRR gene cluster, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015970566.1	1e-106	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A444Y6S2	1e-124	A0A444Y6S2_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF9653	6	34

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07500.1	9e-12	FAR1 family protein