PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.IAE5L
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family HRT-like
Protein Properties Length: 389aa    MW: 44464.9 Da    PI: 9.8495
Description HRT-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.IAE5LgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HRT-like56.74e-18270300131
     HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 
                  iCGv+l+dGsvC ++P++ RKRC +HKGmRi
  Aradu.IAE5L 270 ICGVALGDGSVCINTPAERRKRCPQHKGMRI 300
                  8*****************************7 PP
2HRT-like57.81.8e-18352382131
     HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 
                  iCG+il dGs+C+r PvkgRKRC+eHKG++i
  Aradu.IAE5L 352 ICGIILYDGSPCRRVPVKGRKRCQEHKGKKI 382
                  8***************************997 PP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:2000033Biological Processregulation of seed dormancy process
GO:0097100Molecular Functionsupercoiled DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    Send to blast
MVVAVPNQDH HHSSFIFKRL KREECSHTKH DSIFSKWKIL IGASDWEDHS KGKEGCARYR  60
IHNLPEKACP GVYELGIAVS SRNDLGRQIY KLAPECVVVT YLGETDNVRD RLQCYGRDGS  120
HLHSKTSPEY SIYDSLQKKR PLFQEIFSQG YPIVYRWVAM NNKEEAKRIE SQLLKTFDYA  180
WNISSNGCRR PNDILQKINK ISSSTRTISD MARELLPFTR KQVGIRIKVD EEEEDSDGIY  240
SFISRVFKFN KSRPRKVENI VIANQQDAVI CGVALGDGSV CINTPAERRK RCPQHKGMRI  300
NNVSPAKAFV SPKSKSNLVS EINKFMDQNV SNDDVPDIPK KPVEESSSKT NICGIILYDG  360
SPCRRVPVKG RKRCQEHKGK KIYAKQKMI
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.IAE5L
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015966369.10.0protein EFFECTOR OF TRANSCRIPTION 2
TrEMBLA0A445D3750.0A0A445D375_ARAHY; Uncharacterized protein
STRINGXP_007152922.11e-149(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF94093139
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56780.14e-93effector of transcription2