PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.IDJ2P
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 382aa    MW: 44780.1 Da    PI: 8.3375
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.IDJ2PgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR147.46.2e-1550136191
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  kfY++Y+k +GFs++ +++++    ++i+++   C++eg+ +++ +      +t+++   +C a++ v+ +k  g w ++k+ l+H+H+++p
  Aradu.IDJ2P  50 KFYKHYSKLAGFSTKLRNTTRD--GDKIKNQLILCTREGRWKSKISP---ILKTNPSVGLNCPARIYVHIMKdVGLWTISKVILNHSHPCCP 136
                  6**************9987776..88899999********9998776...99*******************999***************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.0E-1250136IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    Send to blast
MNESTLNQLN ECDLDNSSET HQFDETSCVP DEKFVPKVEM IFKTLEEAGK FYKHYSKLAG  60
FSTKLRNTTR DGDKIKNQLI LCTREGRWKS KISPILKTNP SVGLNCPARI YVHIMKDVGL  120
WTISKVILNH SHPCCPDQAE MLKQHRELSM FVRQLYEDRH IRIPVYLDHH FWAGMRSTQR  180
SESMHSFFNK FITQNSSLGQ FVKEQAEREF DAADFHTMIL YATKSAIEAQ FQHLYTHEKF  240
REVQAQFRGK VNCITRSMHS TLGFTTYEVI EQVSNSTFNK GILCRHSLSV LSFERVDNVA  300
PKYILERWSK NIKRKHTYIK SSQDEPLLEP RSKRFDELVF QLHNICEFIS ESEELTGILH  360
QAFDKTLDHR FSQAPLFTMH RI
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.IDJ2P
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015960283.11e-134protein FAR1-RELATED SEQUENCE 6-like
TrEMBLA0A444ZLV20.0A0A444ZLV2_ARAHY; Uncharacterized protein
STRINGXP_004490233.17e-52(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.12e-20FAR1 family protein