PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.IE5XP
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 88aa    MW: 10084 Da    PI: 8.6536
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.IE5XPgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.41.2e-081421055
                 HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                 r RR++i +++ +L+ l Pk+    +k  s +eiL + ve+Ik+Lq
  Aradu.IE5XP  1 RVRRAQISKRIKKLQGLFPKS----DKQTSTVEILDLDVEHIKELQ 42
                 78******************9....788*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF000108.2E-6142IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.96E-8146No hitNo description
PROSITE profilePS5088811.827141IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.6E-5147IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.4E-10155IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.5E-10152IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    Send to blast
RVRRAQISKR IKKLQGLFPK SDKQTSTVEI LDLDVEHIKE LQEQVKSCLA EVMFIAGSVI  60
FILKFEILCG LFQVICFYTS NLYLSNCG
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.IE5XP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015936790.17e-19transcription factor bHLH130
RefseqXP_025614990.17e-19transcription factor bHLH130
RefseqXP_025671190.17e-19transcription factor bHLH130
TrEMBLA0A445BYY85e-18A0A445BYY8_ARAHY; Uncharacterized protein
STRINGAES693412e-15(Medicago truncatula)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51140.11e-14bHLH family protein