PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.IFN67
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family HB-other
Protein Properties Length: 176aa    MW: 20112.6 Da    PI: 9.3887
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.IFN67genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox55.59.8e-18111160857
                  -HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS
     Homeobox   8 tkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 
                  t++q+ +Le+++++++yp +e++++LA++lgLt++q++ WF+ +R k+k+
  Aradu.IFN67 111 TPSQVMALEKFYNEHKYPMEEMKQDLAEELGLTKKQISGWFCHKRLKDKR 160
                  89**********************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003891.3E-14104165IPR001356Homeobox domain
SuperFamilySSF466893.59E-15106166IPR009057Homeodomain-like
CDDcd000864.04E-14108160No hitNo description
Gene3DG3DSA:1.10.10.604.9E-18110160IPR009057Homeodomain-like
PfamPF000462.6E-15111160IPR001356Homeobox domain
PROSITE profilePS5007114.544111161IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
MSLTEKGTAA AVTCLAITVD FAGRRCVERR AVGQARDRRG GESCRCVYCR LAIVAIMEHQ  60
EAVTGASSRR ERGHKPLLIL CEKPLMRLEN LAPFLFPAEL IEKINKIRLK TPSQVMALEK  120
FYNEHKYPME EMKQDLAEEL GLTKKQISGW FCHKRLKDKR LLKDEAFAPI PSCHER
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.IFN67
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF57923051
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G03250.14e-22HB-other family protein