PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Aradu.IHE1Z

Organism

Arachis duranensis

Taxonomic ID

130453

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 282aa MW: 32663 Da PI: 6.0602

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Aradu.IHE1Z	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	78.3	1.4e-24	133	224	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 +fY++Y++ GF +r+ k+ k+ r+gei+++t+ C++eg+r+++ + ++++r+++++tr+gC+a++++k++ + w+v +++ eHnH+l p Aradu.IHE1Z 133 RFYEQYSRAKGFAMRQGKKMKN-RKGEIVRYTYLCNREGFRHRKWLQmQDRKREHKVVTRCGCQAEMRIKRKAdSTSWYVCRFVDEHNHDLLP 224 5***************9999.7788***********998775788889999***********9899************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	2.7E-22	133	224	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence Send to blast
LLNLIVLDSY SVYQHSDILL ARFATVLLCG FARYRVPGEV SAAETEPIFF NVFLMVHELD 60 AEDEENFNVS EDSENCDATE TLVDTGMEAE AEELEIESPD ERHGEQNGRA KHVMLSRAQI 120 LEMEFANSDE ACRFYEQYSR AKGFAMRQGK KMKNRKGEIV RYTYLCNREG FRHRKWLQMQ 180 DRKREHKVVT RCGCQAEMRI KRKADSTSWY VCRFVDEHNH DLLPAKFVSY LPAYRKISDV 240 DVAHIESLRQ VGISIPKIYE SIAAQAGGFN LVSFTKRDMY NV

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Aradu.IHE1Z

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015972414.2	1e-163	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A445CB86	1e-152	A0A445CB86_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF9185	2	37

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-21	FAR1-related sequence 5