PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.ISN1L
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Dof
Protein Properties Length: 323aa    MW: 35172.9 Da    PI: 8.0179
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.ISN1LgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof126.67.7e-403089261
       zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                 ++k+++cprC+s++tkfCy+nny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrk+k+ 
  Aradu.ISN1L 30 PDKIIQCPRCKSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKHKHL 89
                 7899*****************************************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074787.0E-282287IPR003851Zinc finger, Dof-type
PfamPF027012.3E-323288IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.0813488IPR003851Zinc finger, Dof-type
PROSITE patternPS0136103672IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MSSSDSRDDK KGSQHNDEAT NEEDKTMKKP DKIIQCPRCK SMDTKFCYFN NYNVNQPRHF  60
CKNCQRYWTA GGTMRNVPVG AGRRKHKHLA SQFRSVLVAA AAAAAAAAAT RVPESTNSSS  120
KNNNSDNASG TVLEFCQERG IVNENSSIIY CTESEEESLS LCTNNNNESS SENNNNNASK  180
LLQYYPVPPW VMPWNNVVPQ HGPNSIQWCP TPMVAAATIP VHLVPGPCWG GTPVWVAPGP  240
APGNVSIGSN HSRSSPSSST SNNNSCYSGN GNSPILGKHS RDHSTVFIDE QKSSKCFLVP  300
KIPRIDEQNN NEASVSPIWA TLA
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.ISN1L
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025605598.10.0cyclic dof factor 3
TrEMBLA0A445CS630.0A0A445CS63_ARAHY; Uncharacterized protein
STRINGGLYMA19G29610.28e-90(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2964722
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47500.17e-38cycling DOF factor 3