PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.IUI2U
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 200aa    MW: 23096.8 Da    PI: 5.6343
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.IUI2UgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR174.91.6e-2384178190
         FAR1   1 kfYneYAkevGFsvrkskskks...krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                  +fYneY++  GFs+r+sk  +      +g i+++ fvCs++g+r+ ++ + ++++  +r++tr+gC+a++kv+ ++ +g+w+v+ ++ eHnH++ 
  Aradu.IUI2U  84 DFYNEYGRIKGFSIRRSKVGRCkkaGSEGDIIWQIFVCSRQGERDAKHVHrNDRKMDPRPVTRCGCNARIKVHVDSrNGRWYVDFFSDEHNHDML 178
                  6***************98766622256789**************9998774677778******************99***************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031014.0E-2184178IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    Send to blast
MEGTEEVSSN FQENVTPRVE EDPIENETFV AETESVPIGA SQSDDQRDVI FLDGIGSFGA  60
IDFDVLRAEE IMMIEFVDLK TAYDFYNEYG RIKGFSIRRS KVGRCKKAGS EGDIIWQIFV  120
CSRQGERDAK HVHRNDRKMD PRPVTRCGCN ARIKVHVDSR NGRWYVDFFS DEHNHDMLEA  180
RFRGMMRSHR AIKTGDLHQI
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.IUI2U
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015962293.11e-148protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445D6S41e-134A0A445D6S4_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3290752
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.17e-15FAR1-related sequence 5