PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.J06UK
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB
Protein Properties Length: 351aa    MW: 39659.5 Da    PI: 8.4687
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.J06UKgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.12.7e-152168148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+ Ed +l++ vk+ G+g+W++I +   ++R++k+c++rw ++l
      Aradu.J06UK 21 KGPWTPREDAILIEQVKKCGKGNWSLIRKNSELRRSRKSCRLRWSNHL 68
                     79*******************************************996 PP
2Myb_DNA-binding34.64.3e-1174117146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      +g++++ E++ + d++ ++G++ W++ a ++  gR+++++k++w++
      Aradu.J06UK  74 KGPFSEKEEKTIDDLHVKFGNK-WALMATKVS-GRSDNDIKNFWNS 117
                      79********************.*********.***********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129425.9751672IPR017930Myb domain
Gene3DG3DSA:1.10.10.604.6E-211871IPR009057Homeodomain-like
SuperFamilySSF466898.24E-2619115IPR009057Homeodomain-like
SMARTSM007173.0E-142070IPR001005SANT/Myb domain
CDDcd001671.12E-102368No hitNo description
PfamPF139213.8E-152483No hitNo description
Gene3DG3DSA:1.10.10.603.3E-2172123IPR009057Homeodomain-like
SMARTSM007171.9E-1073121IPR001005SANT/Myb domain
PROSITE profilePS5129414.35873123IPR017930Myb domain
CDDcd001675.15E-676116No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    Send to blast
MISNNNKNNE DGESWRDDLR KGPWTPREDA ILIEQVKKCG KGNWSLIRKN SELRRSRKSC  60
RLRWSNHLNP DLKKGPFSEK EEKTIDDLHV KFGNKWALMA TKVSGRSDND IKNFWNSRMK  120
KRLRKYPPQI TVQQAQHFSS SPFYSVLASC YPKNNLSVEL PSNISAANPP PNHNQKQPNQ  180
NDSSSSSSSS FSCTNNNASF VLPLTPVSPY CKSNGLLNDV VMECNALCRK GKSKMDATIV  240
IGKEEEELAD KRKIIEEPPL PPVGTSKEQE TATIIATQSS SHQLISTEKN DNGGCNNNKE  300
ALNNSMPQMD DELLSILKNC PIYSPMRKWY KVDDDDDGDL NLGNLWNIDG W
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A3e-26181234108B-MYB
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.J06UK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015935996.10.0transcription factor MYB101-like
TrEMBLA0A445BWS50.0A0A445BWS5_ARAHY; Uncharacterized protein
STRINGXP_007149977.16e-54(Phaseolus vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G32460.11e-43myb domain protein 101