PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.J3G31
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Trihelix
Protein Properties Length: 286aa    MW: 31797.3 Da    PI: 5.5526
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.J3G31genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix62.97.5e-2025852686
     trihelix 26 lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
                 + +p+W+ vs++++++g++r+p+qC+++w+nl+++ykkike+e++ ++e++s +++ ++++
  Aradu.J3G31 25 SPEPKWQLVSSYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWESRARDETESFWVMRNDMR 85
                 5689***********************************************9*****9997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.8E-102881No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0050777Biological Processnegative regulation of immune response
GO:0071219Biological Processcellular response to molecule of bacterial origin
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0042803Molecular Functionprotein homodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MTANRRRPGR SAVGSPSIGS PSIGSPEPKW QLVSSYCKKH GVNREPVQCR KRWSNLAGDY  60
KKIKEWESRA RDETESFWVM RNDMRRERKL PGYFDKEVYD ILDAAVSPAL AVIPASSATA  120
AKVAEEVEGG DDAEVHIYDS NRRVSVGGGE DGLFSDSERD EVFVSGNKNV PHPAIPISAE  180
KQYQPPLQGE GNAQDATNEK QPASNPDSTS QGERKRKRFS VDSEEETLQS QLIDVLEKNG  240
RMLRDQLEAQ NVNFQLDRQQ QKDTASNIVA VLDKLADALG RIADKL
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional repressor that binds DNA and plays a negative role in regulating microbe-associated molecular patterns-(MAMPs, e.g. flg22, elf18, chitin, and LPS) triggered immunity (PTI) by negatively regulating immune gene expression. {ECO:0000269|PubMed:25770109}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00288DAPTransfer from AT2G33550Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.J3G31
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015962502.10.0trihelix transcription factor ASR3
SwissprotQ8VZ205e-75ASR3_ARATH; Trihelix transcription factor ASR3
TrEMBLA0A445DAK70.0A0A445DAK7_ARAHY; Uncharacterized protein
STRINGGLYMA08G28880.11e-128(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF21653375
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.12e-75Trihelix family protein
Publications ? help Back to Top
  1. Vidal EA, et al.
    Integrated RNA-seq and sRNA-seq analysis identifies novel nitrate-responsive genes in Arabidopsis thaliana roots.
    BMC Genomics, 2013. 14: p. 701
    [PMID:24119003]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]