PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.J4SMU
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 445aa    MW: 51215.1 Da    PI: 9.9567
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.J4SMUgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR130.51.2e-098514991
         FAR1 49 ekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91
                 +++r+ r+  rt+C a+l+vk+++  g+w+v+ +++ HnH+l+p
  Aradu.J4SMU  8 DRSREARSLMRTKCPARLRVKLDYgCGRWKVSCFVESHNHDLTP 51
                 578999******************99***************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031017.1E-7851IPR004330FAR1 DNA binding domain
PROSITE profilePS5096610.052151187IPR007527Zinc finger, SWIM-type
SMARTSM005752.2E-5162189IPR006564Zinc finger, PMZ-type
PfamPF044340.0013163179IPR007527Zinc finger, SWIM-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    Send to blast
MRYLDMDDRS REARSLMRTK CPARLRVKLD YGCGRWKVSC FVESHNHDLT PPQFVHLNTL  60
IDFMHNLDRA LKEYRNNKLI ADFKSQCSEP VVITSLEVYE RSASCYFTQN IFKKIRNEIQ  120
RAGALNITVP STTLDKVEFS VTALRDLAKD RRVEVDRGKN LFSCSCKLFE SRGIPCSHIF  180
CAMKFENILE FPNSLIYKRW TKNAKNEFIS TEMPVNDDIK RSRKQGKSTP NVNVEGINDP  240
FVVKSKGAPS KRSCWRKKRA CSNYHKYGHY YKHYPDLMKH SVEGNPRDRL YGNASAKDSG  300
FSPERFANSS KSFSIKSEHH SGPNTKPFKK GGTRKFTATG MRNRKGKDNT FVERSLHESS  360
ESIDIASTNG VFNRNLYSLT QQVKESQQDK RHSFTKYECV NDVIDDKCDT RHVQIDVQDP  420
LPSSLPCGNK QGSYMALFAS MHRTL
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.J4SMU
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371770.0HQ637177.1 Arachis hypogaea clone AHF-303L13 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025703006.10.0protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444Y6S20.0A0A444Y6S2_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF845424
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-13FAR1-related sequence 5