PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.J6JAI
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 387aa    MW: 44741.2 Da    PI: 8.2829
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.J6JAIgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR168.71.5e-21189280191
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 
                  +fYn+Y+   GF +rk+   +  ++g+i++r++vC+keg r+ +  + ++++r+ r+ trt+C a+l+vk+++  g+w+v+ +++ HnH+l+p
  Aradu.J6JAI 189 QFYNAYSCWHGFVMRKDDVVRD-NQGRIISRQLVCNKEGWRNMRYLDmDDRSREARSLTRTKCPARLRVKLDYgCGRWKVSCFVESHNHDLTP 280
                  6****************99998.8888***************9998867889999******************99***************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031019.9E-20189280IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    Send to blast
MHVAQAFKSC FTSWKTHRTH CPVVIPPSFY TQYRTLKFVI LEPTTEPCLI FSPSFDTQRP  60
FSKNDILRVR GSGTGTLLSS DWRRRQLRRG RTLKCVGLGT NHLPPTPTVH FFSAEAQPLL  120
VIKLILASLR CCHWLRLVTI LEDNAEDDDV DSLDSTSKSE EVCGVKRIAD LMVEDIWNLE  180
FRTEDEACQF YNAYSCWHGF VMRKDDVVRD NQGRIISRQL VCNKEGWRNM RYLDMDDRSR  240
EARSLTRTKC PARLRVKLDY GCGRWKVSCF VESHNHDLTP PQFAHLVPAN RRLTNTLIEF  300
MHNLDRALKE YRNNELIADF KSQCSEPVMI TSLEVYERSA SCYFTRNIFK EIRNEIQRAG  360
ALNITVLSTT LDKVEFSVTA LGDPAKD
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.J6JAI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371770.0HQ637177.1 Arachis hypogaea clone AHF-303L13 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015965951.11e-106protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444Y6S21e-154A0A444Y6S2_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9653634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-20FAR1-related sequence 5