PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.JP1LR
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 170aa    MW: 19489.3 Da    PI: 9.1311
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.JP1LRgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR123.42e-07112158250
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktek 50 
                   Y++YAk +GFs+r+++++++   +ei+++  +Cs+e k +++  +t +
  Aradu.JP1LR 112 VYKNYAKAAGFSTRVRSTNRK--GNEIKNQLITCSREEKWKSKICQTAQ 158
                  7***************98887..8889**********999988777444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031017.5E-5112157IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
KFARSSSRAS FPIFSIVLFL SFLIGLFFVI DVSSSLYNSS FIFFSIFWFL KSKFELILKI  60
IDDSTSDCQL NQGEVDYEFE SKIVPEHLSV IDDQFVPKVG MTFTTLEDAG KVYKNYAKAA  120
GFSTRVRSTN RKGNEIKNQL ITCSREEKWK SKICQTAQGT KHVHSSYNRE
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.JP1LR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371786e-74HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020992539.11e-53protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444YPX92e-55A0A444YPX9_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477